CDS

Accession Number TCMCG057C24275
gbkey CDS
Protein Id XP_018491979.1
Location join(10418889..10419010,10419261..10419918,10420014..10420205,10420312..10420991,10421186..10421654,10421742..10421837,10422045..10422137,10422223..10422417,10422487..10422579,10422657..10422863,10422945..10423034,10423127..10423288)
Gene LOC108862371
GeneID 108862371
Organism Raphanus sativus

Protein

Length 1018aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636477.1
Definition PREDICTED: DNA polymerase I B, chloroplastic/mitochondrial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA polymerase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R00375        [VIEW IN KEGG]
R00376        [VIEW IN KEGG]
R00377        [VIEW IN KEGG]
R00378        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K02335        [VIEW IN KEGG]
EC 2.7.7.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03030        [VIEW IN KEGG]
ko03410        [VIEW IN KEGG]
ko03420        [VIEW IN KEGG]
ko03440        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
GOs GO:0000002        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003887        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006264        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008409        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0032042        [VIEW IN EMBL-EBI]
GO:0033258        [VIEW IN EMBL-EBI]
GO:0033259        [VIEW IN EMBL-EBI]
GO:0034061        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGGTCTCTCTCCGCCACTTCTCTCCTTCTTCTTCTTTCTGGCTCTCGCGCCGTCCTCGCTCTTCTTCTTCTTCTTCCCTTCTTTCCTCACTCGTGCCTCGCCATACAATCCTTACCAGAAAAGTAGCTATCACTAATGGAAACGCTAGATACTGCACTGCTACAGCTTCTGGTGGTATCCATGGGTTTCACCCTTCAGGTCGTCAAGGGACTTCTACTATTGAGTTTAGCGGAGAGTGGAAACTTAGTGTTGGATCTAAGACGGCCATAATGGTTCCACCAACTGTGAAACTAAACGGAGCTGTAAGTGCTTGGAGAAAAGGGGAAGTCAATCAGGATGATGCTTCCGGTAACTATTTCAGAAGCTTCGTCCCAAAGATAGATGATGTTCAATCTTACGGAAACTACCAGCTAGAACCCAGAGGTGACGTTACCACGGTTGATAGAGAATTGAATAGCTTTGCGCAACAGAAGAGTCTAAGAGGACCACCTCTCGTAGCGTTGCCAAGGAAGAATGTTAAGGCTAGGGAGAAGATAGATGACGAGGATGTGCGTGGAAGACAAAGACCTCTTGTTGCTTCTTTTGACAGTGCAAGAAATGAGAGTACGGTAACCATTTCCAAAGTGGGGAAACGGACCGACCTGTCGAGAGTACGCGCGAACCTTACAAAAATATATAATAAGGTTCGTGTTGTCGATAATGTGTCTACCGCAAAGGAAATTGTGGCCAAGCTCGTGAATCAATATAGGGATCTCGTCCATGCTTGCGATACTGAGGTGTCGAGGATTGATGTGAAGAGTGAAACACCTGTGGACCATGGCGAGCTTATATGTTTCAGTATATATTGTGGATCAGAAGCAGACTTTGGAGATGGAAAGTCATGTATATGGGTGGATGTTCTTGGTGAAAATGGCAAGGATGTCTTGGCTGAGTTTAAGCCATTTTTCGAAGACTCATCCATTAAAAAAGTATGGCATAACTACAGCTTTGATAACCACATTATAAGAAATTACGGAATCAAGCTTTCTGGTTTTCATGGTGATACAATGCACATGGCACGATTGTGGGATTCTTCGAGACAGACAGCAGGTGGTTATTCGCTTGAAGCACTCACAAGTGACCCAAGAGTTCTTGGGGGAACTGAAACAAAGGAGGAAGCAGAGCTATTCGGTAAAATATCAATGAAGACGATTTTCGGCAAGGGAAAACTGAAGAAAGATGGAACTGAGGGGAAACTGGTGGTCATTCCACCTGTTGAGGAGCTACAAAAAGACGACCGAGAAGCTTGGATCTCGTACTCTGCGTTGGATTCGATAAGCACACTAAAGCTTTACGAGAGCATGAAGAAACAACTGCAGGTGAAGAAGTGGTTTCTTGATGGGAAGCTAGTTTCTGGAAAGAACATGTTTGACTTTTACCAAGAGTATTGGCAACCTTTTGGTGAACTTCTTGCTACAATGGAAGCGGAGGGGATGCTAGTAGATAGGGAATATCTTGCGCAGATTGAGATTGTAGCCAAGGGAGAACAGGAAGTTGCTGTTTCTAGGTTCCGGAGTTGGGCCTCGAAGCATTGTCCTGATGCAAAGCATATGAATGTTGGCAGTGACACGCAGTTAAGACAGCTCTTTTTCGGTGGCATTTCTAACAGTTTTAATGGTGAGGATCTTCCATATGAAAAACTGTTCAAAGTCCCCAATGTTGACAATGTGATTGAAGAAGGTAAAAAAAGAGCCACGAAGTTCCGGAATATCAAACTGCATAGGATTAGTGACAATCCTTTGCCGACTGAAAAGTTCACCGCCTCAGGCTGGCCTTCTGTTAGTGGAGATACTTTGAAAGCATTAGCTGGGAAAGTCTCTGCAGCGTATGACTTTACAGAGGTAGCTGCAGATGATAATTCTCTAGAAGAAAACATCGGAGATGAGGAGTCTATGTCGCTGCCAGATGAAATTTTGGAACCACAAACATCTGTTGAATCAGACACATCTGCTTTTGGAACAGCGTTTGATGCGTTTGGAGGGGGTGAGAGTGGAAAGGAGGCTTGCCATGCAATTGCTTCACTGTGCGAAGTTTGCTCCATTGATTCCTTAATATCCAATTTTATTCTTCCTTTGCAGGGAAGTAATGTATCAGGCAAAGATGGTCGTGTCCACTGCTCCCTGAATATCAACACTGAAACTGGACGGTTGTCAGCTAGAAGGCCAAATTTGCAGAACCAACCTGCGCTGGAGAAAGATCGGTACAAGATCCGTCAGGCCTTTATAGCGTCACCTGGAAACTCTCTTATTGTTGCTGATTATGGCCAGCTGGAACTTAGGATTCTGGCACATCTTGCTCGTTGCAAAAGCATGATGGAAGCTTTTGTGGCCGGTGGTGACTTCCACTCAAGAACAGCCATGAATATGTATCCGCATATTCGTGAAGCTGTCGAAAATGGTGAAGTGCTCCTTGAATGGCATCCACAACCTGGACAGGAGAAGCCGCCAGTGCCATTATTAAAGGACGCCTTTGCTTCTGAGAGAAGAAAAGCTAAGATGCTCAACTTTTCGATTGCATATGGGAAGACTGCTATTGGGCTTTCTAGAGACTGGAAGGTTTCGGTAGAAGAAGCTCAAGAAACAGTTAATCTCTGGTATAATGACAGACAAGAAGTCCGGAAATGGCAAGAGCTACGCAAGAAAGAAGCTATACAAAATGGGTATGTGCTGACTTTGTTGGGAAGGGCTCGTAAGTTTCCTGCATACCGTTCACGTGCCCAAAAGAACCATATTGAACGAGCAGCAATCAACACTCCTGTTCAGGGAAGTGCGGCTGATGTCGCCATGTGCGCTATGCTGGAGATAACAGCAAATGAACGTTTAAAGGAGCTTGGTTGGAAGCTGCTTCTACAAGTTCATGATGAAGTAATCTTGGAAGGACCAAGTGAATCAGCCGAGATAGCTAAAGCCATAGTTGTGGACTGCATGTGTAGACCTTTCAACGGCAAGAACATCCTCTCAGTCGATTTATCTGTTGATGCCAAGTGTGCTCAGAACTGGTATGCTGCTAAGTAA
Protein:  
MGVSLRHFSPSSSFWLSRRPRSSSSSSLLSSLVPRHTILTRKVAITNGNARYCTATASGGIHGFHPSGRQGTSTIEFSGEWKLSVGSKTAIMVPPTVKLNGAVSAWRKGEVNQDDASGNYFRSFVPKIDDVQSYGNYQLEPRGDVTTVDRELNSFAQQKSLRGPPLVALPRKNVKAREKIDDEDVRGRQRPLVASFDSARNESTVTISKVGKRTDLSRVRANLTKIYNKVRVVDNVSTAKEIVAKLVNQYRDLVHACDTEVSRIDVKSETPVDHGELICFSIYCGSEADFGDGKSCIWVDVLGENGKDVLAEFKPFFEDSSIKKVWHNYSFDNHIIRNYGIKLSGFHGDTMHMARLWDSSRQTAGGYSLEALTSDPRVLGGTETKEEAELFGKISMKTIFGKGKLKKDGTEGKLVVIPPVEELQKDDREAWISYSALDSISTLKLYESMKKQLQVKKWFLDGKLVSGKNMFDFYQEYWQPFGELLATMEAEGMLVDREYLAQIEIVAKGEQEVAVSRFRSWASKHCPDAKHMNVGSDTQLRQLFFGGISNSFNGEDLPYEKLFKVPNVDNVIEEGKKRATKFRNIKLHRISDNPLPTEKFTASGWPSVSGDTLKALAGKVSAAYDFTEVAADDNSLEENIGDEESMSLPDEILEPQTSVESDTSAFGTAFDAFGGGESGKEACHAIASLCEVCSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIASPGNSLIVADYGQLELRILAHLARCKSMMEAFVAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASERRKAKMLNFSIAYGKTAIGLSRDWKVSVEEAQETVNLWYNDRQEVRKWQELRKKEAIQNGYVLTLLGRARKFPAYRSRAQKNHIERAAINTPVQGSAADVAMCAMLEITANERLKELGWKLLLQVHDEVILEGPSESAEIAKAIVVDCMCRPFNGKNILSVDLSVDAKCAQNWYAAK